Colourful red and green macroalgae growing in a reef aquarium

KNOWLEDGE, CULTIVATED.

Algae IDs

Identify common reef growth, choose useful macroalgae and understand what to do when a patch becomes a problem.

Friend: useful when managed. Caution: context or identification matters. Pest: troublesome in a coral display. Photos are reference examples, not species diagnoses.

Start with identification and physical removal. Grazing varies; choose animals for the tank’s long-term needs. Keep nutrients balanced rather than chasing zero, and follow the current product label before treatment.

Written by Christian, Signature FragsLast reviewed:

Showing 1–12 of 25 cards · Page 1 of 3

Pest algae

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Feather-shaped Bryopsis growing from reef rock, with a central stalk and fine side branches.

Bryopsis in a reef tank: look for the feather-shaped fronds, central stalk and fine side branches.

Bryopsis

Pest

Bryopsis spp.

An invasive feathered alga; ordinary grazers often leave it.

Pest algae · Green macroalgae

Quick ID
Small green feathers: a central stalk with fine side branches.
Benefits / uses
Photosynthesises, but offers little benefit in a coral display.
Problems / risks
Anchors firmly and regrows from remaining growth; can crowd coral bases.
Will anything eat it?
Fish and snails often ignore it; grazing alone is unreliable.
Products / equipment
Flux Rx (fluconazole) is labelled for Bryopsis. Manufacturer: do not use with macroalgae or a refugium.
Common lookalikes
Hair algae lacks neat feathers; feather Caulerpa has larger fronds and creeping runners.
Care / control
Isolate affected plugs where practical; remove growth and siphon fragments.
Research sources

Identification / care reference · Further care / manufacturer guidance

Green hair algae around an emerald crab in an aquarium.

Green hair algae around an emerald crab in an aquarium.

Green hair algae

Pest

Several filamentous green algae; including Derbesia-type forms

Useful grazing food in small amounts; a nuisance when it blankets the display.

Pest algae · Green macroalgae

Quick ID
Soft green threads or tufts, rather than tidy feather-shaped branches.
Benefits / uses
Grazing food; intentionally grown algae can export nutrients when harvested.
Problems / risks
Long growth catches debris, shades coral and can return after pulling.
Will anything eat it?
Many tangs, rabbitfish, blennies and snails eat short growth; appetite varies.
Products / equipment
Flux Rx is labelled for green hair algae; avoid use with macroalgae/refugia. Removal and husbandry come first.
Common lookalikes
Bryopsis, coarse turf and freshwater Oedogonium; a photo rarely establishes the species.
Care / control
Pull and siphon, clean detritus traps and review feeding, light and nutrient export.
Research sources

Identification / care reference · Further care / manufacturer guidance · Further care / manufacturer guidance

Coarse Cladophora collected at Waikiki; a reference for branching green filaments.

Coarse Cladophora collected at Waikiki; a reference for branching green filaments.

Green turf / Cladophora

Pest

Mixed turf communities; Cladophora spp. are one example

A growth form rather than one species; established patches can be stubborn.

Pest algae · Green macroalgae

Quick ID
Short, dense, coarse or branching green growth attached tightly to rock.
Benefits / uses
Natural grazing habitat; turf is useful inside a managed algae scrubber.
Problems / risks
In the display it traps debris and can occupy space around coral bases.
Will anything eat it?
Some urchins and herbivorous fish graze it; coarse mature patches may resist grazing.
Products / equipment
Manual removal first; no dependable selective reef-safe product recommended.
Common lookalikes
Soft hair algae; microscope examination separates similar filamentous genera.
Care / control
Scrub accessible rock outside the display in saltwater; siphon loosened material.
Research sources

Identification / care reference · Further care / manufacturer guidance · Further care / manufacturer guidance

A large Valonia bubble in the wild; aquarium bubbles may be much smaller.

A large Valonia bubble in the wild; aquarium bubbles may be much smaller.

Green bubble algae

Pest

Valonia / Ventricaria-type bubble algae

A few bubbles are manageable; expanding clusters become a nuisance.

Pest algae · Bubble algae

Quick ID
Glossy green spheres or oval vesicles attached to rock or plugs.
Benefits / uses
Interesting natural growth, but not a preferred nutrient-export crop.
Problems / risks
Clusters spread into crevices and compete for space around corals.
Will anything eat it?
Some emerald crabs and rabbitfish eat it; neither is a guaranteed solution.
Products / equipment
Manual removal first; no dependable selective reef-safe product recommended.
Common lookalikes
Air bubbles disappear when disturbed; red bubble algae belongs to different groups.
Care / control
Lift bubbles and attachment points intact where possible; siphon debris and revisit regrowth.
Research sources

Identification / care reference

Flat ribbons with repeated forks, characteristic of Dictyota.

Flat ribbons with repeated forks, characteristic of Dictyota.

Dictyota

Pest

Dictyota spp.

A brown macroalga best contained before it spreads across coral rock.

Pest algae · Brown macroalgae

Quick ID
Thin, flat brown or olive ribbons that repeatedly split into forks.
Benefits / uses
Natural reef habitat; usually unwanted in a mixed coral display.
Problems / risks
Fragments and attached growth can establish new patches.
Will anything eat it?
Chemical defences deter some herbivores; grazing depends on species and individual animals.
Products / equipment
Manual removal first; no dependable selective reef-safe product recommended.
Common lookalikes
Lobophora makes overlapping plates; Halymenia is usually red and softer.
Care / control
Remove occupied plugs or accessible growth; collect fragments rather than dispersing them.
Research sources

Identification / care reference · Further care / manufacturer guidance

Overlapping brown Lobophora blades on a natural reef.

Overlapping brown Lobophora blades on a natural reef.

Lobophora

Pest

Lobophora spp.

Leathery brown growth can overgrow or compete with coral.

Pest algae · Brown macroalgae

Quick ID
Brown, overlapping fan-shaped blades or low plates with a leathery feel.
Benefits / uses
Part of natural reef communities; no special advantage in a coral display.
Problems / risks
Can occupy coral margins; effects vary between species and conditions.
Will anything eat it?
Some rabbitfish and urchins graze it, while other herbivores avoid it.
Products / equipment
Manual removal first; no dependable selective reef-safe product recommended.
Common lookalikes
Brown coralline is hard and calcified; Dictyota forms narrow forked ribbons.
Care / control
Remove accessible plates and attached growth; monitor coral margins and regrowth.
Research sources

Identification / care reference · Further care / manufacturer guidance · Further care / manufacturer guidance

Slime & lookalikes

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Burgundy-red slime mats covering live rock beside zoanthids and aquarium sand.

Red slime in a reef tank: the burgundy sheets cover the rock between the zoanthids and sand.

Cyanobacteria / red slime

Pest

Cyanobacteria; photosynthetic bacteria

An algae lookalike; treatment differs from true macroalgae.

Pest algae · Slime & lookalikes · Not a true alga

Quick ID
Slippery red, purple, green or dark sheets; sometimes with trapped bubbles.
Benefits / uses
Natural microbes, but thick aquarium mats are undesirable.
Problems / risks
Mats cover sand and coral surfaces; large die-offs can affect oxygen.
Will anything eat it?
Most fish and common algae snails are unreliable controls.
Products / equipment
Boyd Chemiclean is marketed for cyano-associated stains. Follow the current label and provide strong aeration; Dino X does not treat cyano.
Common lookalikes
Diatoms form dust; dinos can form stringy mucus. Colour and bubbles alone do not confirm an ID.
Care / control
Siphon mats, remove trapped detritus and improve circulation and nutrient balance.
Research sources

Identification / care reference · Further care / manufacturer guidance

Ostreopsis cf. ovata under a microscope; other dinoflagellate groups look different.

Ostreopsis cf. ovata under a microscope; other dinoflagellate groups look different.

Nuisance dinoflagellates

Pest

Benthic dinoflagellates; several different genera

Confirm the group under a microscope before choosing treatment.

Pest algae · Microalgae · Slime & lookalikes

Quick ID
Brown mucus, strings or bubbles may occur; these signs are not diagnostic.
Benefits / uses
Many dinoflagellates are beneficial; this card concerns nuisance surface blooms.
Problems / risks
Some nuisance groups produce toxins and harm grazers or coral.
Will anything eat it?
Do not rely on fish or snails; some groups are hazardous to grazers.
Products / equipment
Fauna Marin Dino X is an option after ID. Its manual warns about macroalgae, echinoderms, sea hares, clams and sponges.
Common lookalikes
Cyano, diatoms and golden algae; similar brown coatings need different approaches.
Care / control
Obtain a microscope ID, siphon growth and avoid driving nitrate/phosphate to zero. UV helps some water-column groups.
Research sources

Identification / care reference · Further care / manufacturer guidance

Small-cell Amphidinium close-up reference Close-up / microscope
Small-cell Amphidinium reef-tank appearance reference In a reef tank

Top: microscope reference. Bottom: reef-tank appearance; colour alone cannot confirm the ID.

Small-cell Amphidinium

Pest

Amphidinium spp. — small-cell hobby grouping

Identify the cells before choosing treatment.

Pest algae · Microscopic ID · Reef-tank appearance

Quick ID
Tiny golden-brown oval cells, often moving rapidly; use a calibrated scale and video, not magnification alone. In the tank: a persistent brown film on sand, glass or rock.
Benefits / uses
Part of microbial communities; a dense display bloom offers no practical benefit.
Problems / risks
Can irritate coral and recur after cleaning. Small-cell is a hobby grouping, not a confirmed species name.
Will anything eat it?
Grazing is variable; extra snails are not a dependable cure and may be exposed to harmful cells.
Products / equipment
A correctly sized enclosed UV steriliser is an option for swimming cells. Nutrient supplements only when testing shows a shortfall; follow labels.
Common lookalikes
Large-cell Amphidinium, other small flagellates and diatoms. Film colour alone cannot distinguish them.
Care / control
Confirm the ID, siphon deposits and maintain stable, measurable nitrate and phosphate. Check a night sample: UV can help when cells enter the water.
Research sources

Taxonomy and identification · Aquarium care guide · Microscope reference · Tank reference

Large-cell Amphidinium close-up reference Close-up / microscope
Large-cell Amphidinium reef-tank appearance reference In a reef tank

Top: microscope reference. Bottom: reef-tank appearance; colour alone cannot confirm the ID.

Large-cell Amphidinium

Pest

Amphidinium spp. — large-cell hobby grouping

Identify the cells before choosing treatment.

Pest algae · Microscopic ID · Reef-tank appearance

Quick ID
Larger, flattened oval cells with a small off-centre cap or beak; often glide over the slide. In the tank: rust-brown sand patches, sometimes with little mucus or bubbling.
Benefits / uses
Normal low-level microbial diversity; an extensive sandbed bloom is undesirable.
Problems / risks
Often persists within the sand. Some outbreaks appear less toxic, but this does not establish that a strain is harmless.
Will anything eat it?
Some micrograzers may consume cells; do not buy sand-sifting livestock as a guaranteed treatment.
Products / equipment
Silicate dosing to encourage competing diatoms is an optional, monitored advanced approach after confirmed ID—not a universal cure. Avoid blind dosing.
Common lookalikes
Diatoms, small-cell Amphidinium and mixed films; appearance and apparent cell size need context.
Care / control
Confirm under a microscope, remove surface deposits gently and correct nutrient depletion. UV often has limited reach because much of the population stays in the sand.
Research sources

Taxonomy and identification · Aquarium care guide · Microscope reference · Tank reference

Large-cell Amphidinium: aquarist observations and experimental approaches

Ostreopsis close-up reference Close-up / microscope
Ostreopsis reef-tank appearance reference In a reef tank

Top: microscope reference. Bottom: reef-tank appearance; colour alone cannot confirm the ID.

Ostreopsis

Pest

Ostreopsis spp.

Identify the cells before choosing treatment.

Pest algae · Microscopic ID · Reef-tank appearance

Quick ID
Flattened oval or teardrop cells, often pivoting around an attachment point. In the tank: brown mucus and long bubble-bearing strings on rock, glass, sand or coral.
Benefits / uses
A natural benthic organism; dense nuisance blooms are best controlled.
Problems / risks
Some species produce potent toxins and can harm grazers. Avoid splashing or aerosolising suspect growth; do not scrub or pressure-wash affected rock into the air.
Will anything eat it?
Do not add snails or herbivorous fish as a remedy for a potentially toxic bloom.
Products / equipment
UV and activated carbon are supportive tools. Chemical treatment requires checking the current label and livestock compatibility; no guaranteed one-bottle cure.
Common lookalikes
Coolia, Prorocentrum, chrysophytes and cyano; bubbles and strings alone are not a diagnosis.
Care / control
Microscope confirmation first. Siphon gently, maintain aeration and balanced nutrients. Enclosed UV can help when cells detach into the water; use activated carbon according to its label.
Research sources

Taxonomy and identification · Aquarium care guide · Microscope reference · Tank reference

Coolia close-up reference Close-up / microscope
Coolia reef-tank appearance reference In a reef tank

Top: microscope reference. Bottom: reef-tank appearance; colour alone cannot confirm the ID.

Coolia

Pest

Coolia spp.

Identify the cells before choosing treatment.

Pest algae · Microscopic ID · Reef-tank appearance

Quick ID
Rounded, lens-like cells with visible grooves; the view changes as the cell rotates. In the tank: brown films or patches on sand and rock, sometimes mixed with other growth.
Benefits / uses
A natural reef microbe; a dense nuisance bloom has no display benefit.
Problems / risks
Toxicity varies by species and strain. A round cell does not establish the species or its toxicity.
Will anything eat it?
No dependable clean-up crew solution; avoid exposing new grazers to an unidentified bloom.
Products / equipment
Enclosed UV is useful only for cells passing through it; carbon may support toxin management. Avoid stacking chemical treatments.
Common lookalikes
Ostreopsis and Gambierdiscus; specialist morphology or molecular work may be needed for an exact species ID.
Care / control
Record a microscope video and seek confirmation. Siphon patches and stabilise nutrients. Check whether cells leave surfaces at night before relying on UV.
Research sources

Taxonomy and identification · Aquarium care guide · Microscope reference · Tank reference

Close-up of vivid red anemone tentacles with pink tips

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